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Training

Table of Contents

Courses

  • The Hitchhiker’s Guide to scRNA-seq
    Program: ENLIGHT-TEN+
    Location: Lisbon, Portugal | 08–12 Jul 2024

    • Title: The Hitchhiker’s Guide to scRNA-seq
    • Site: Course website
    • Organized by: Instituto de Medicina Molecular João Lobo Antunes
    • Place: Instituto de Medicina Molecular João Lobo Antunes, Lisbon, Portugal
  • Bioinformatics for T-Cell Immunology
    Type: Course Materials
    Location: Cambridge, UK | 11–15 Jul 2022

    • Title: Bioinformatics for T-Cell Immunology
    • Site: Course website
    • Organized by: EMBL-EBI
    • Place: EMBL-EBI, Cambridge, UK
  • Inspiring Science 2020 – Bioinformatics
    Type: Workshop
    Location: Oeiras, Portugal | 2–3 & 9–10 Dec 2020

    • Title: Inspiring Science 2020 – Bioinformatics
    • Target audience: Portuguese high-school biology teachers
    • Aim: Introduce basic concepts of bioinformatics and practical exercises for classroom use
    • Organized by: IGC Public Engagement Unit
    • Place: Instituto Gulbenkian de Ciência, Oeiras, Portugal (virtual format)
  • Advanced Topics in Bioinformatics
    Type: Master Class
    Location: Oeiras, Portugal | 24 Mar 2020

    • Class: Advanced Topics in Bioinformatics for students from Biochemistry for Health master course – ITQB NOVA, Universidade NOVA de Lisboa
    • Title: Practical introduction to the upstream and downstream data analysis of 16S rRNA gene amplicon data
    • Place: Oeiras, Portugal (virtual format)
  • Microbiome Visualization with Biome-Shiny
    Type: BioData.pt Crash Course
    Location: Oeiras, Portugal | 31 Jan 2020

    • Title: BioData.pt Crash Courses: Microbiome Visualization with Biome-Shiny
    • Site: Course website
    • Organized by: BioData.pt, IGC Genomics & Bioinformatics Units (GE/UBI-IGC)
    • Place: Instituto Gulbenkian de Ciência, Oeiras, Portugal

Tutorials

This section lists the overall tutorials that you can follow:

  • Get full taxonomic lineage from NCBI with accession numbers [link]

  • GTDB and RefSeq-RDP DBs parsed for the addSpecies() dada2 function [link]

  • EcoBioTec - QIIME2 & PICRUSt tutorials [link]